centromeric outer repeat transcripts absent

centromeric outer repeat transcripts absent

http://purl.obolibrary.org/obo/FYPO_0000273

An RNA metabolism phenotype observed in the vegetative growth phase of the life cycle in which RNAs transcribed from the centromere outer repeat region are absent. [ https://www.pombase.org/gene/mah http://www.ncbi.nlm.nih.gov/pubmed/20211136 ]

Synonyms: centromeric outer repeat-derived transcripts absent centromeric outer repeat transcripts absent during vegetative growth centromere outer repeat transcripts absent

Tree view
Term mappings

Preferred root terms

All terms

This is just here as a test because I lose it

Term information

comment

This term encompasses both unprocessed RNA transcribed from the centromere outer repeat region and siRNAs derived by dicer-mediated processing of the primary transcripts. Use this term only for levels of RNA transcribed from endogenous centromere outer repeat sequences. For levels of RNA transcribed from an exogenous reporter gene placed in the outer repeat region, consider 'abnormal chromatin silencing at centromere outer repeat region' (FYPO:0002346).

created by

midori

creation date

2011-04-19T04:37:01Z

has related synonym

centromeric outer repeat transcripts absent during mitotic cell cycle

has obo namespace

fission_yeast_phenotype

FYPO:0000273

Term relations

Subclass of:

decreased centromeric outer repeat transcript level
has part some cell morphology trait
has part some (
    lacks all parts of type and
    during some single-celled organism vegetative growth phase and
    characteristic of some vegetative cell (sensu Fungi) and
    towards some regional_centromere_outer_repeat_transcript)